Our Publications

Genome-wide association study reveals ethnicity-specific SNPs associated with ankylosing spondylitis in the Taiwanese population

Journal of Translational Medicine IF 8.440


scDrug: From single-cell RNA-seq to drug response prediction

Computational and Structural Biotechnology Journal IF 6.155

2022. 12. 8

Genome-wide analyses identify novel risk loci for cluster headache in Han Chinese residing in Taiwan

The Journal of Headache and Pain IF 8.588


pubmedKB: an interactive web server for exploring biomedical entity relations in the biomedical literature

Nucleic Acids Research IF 16.971


Efficiently predicting vancomycin resistance of Enterococcus faecium from MALDI-TOF MS spectra using a deep learning-based approach.

Frontiers in Microbiology IF 5.64 accepted


ezGeno: An Automatic Model Selection Package for Genomic Data Analysis

Bioinformatics IF 6.937


Connecting MHC-I-binding motifs with HLA alleles via deep learning

Communcations Biology IF 6.268


DockCoV2: a drug database against SARS-CoV-2

Nucleic Acids Research IF 16.971


Potential Therapeutic Agents for COVID-19 Based on the Analysis of Protease and RNA Polymerase Docking



GenEpi: gene-based epistasis discovery using machine learning

BMC Bioinformatics IF 3.169


variant2literature: full text literature search for genetic variants



QCheck: A Web Server for Quality Check of Next Generation Sequencing Data with Standards and Guidelines

The Journal of molecular diagnostics: JMD




TAIGenomics platform


The 2022 Nucleic Acids Research database issue and the online molecular biology database collection

Nucleic acids research, 2022

Resources and computational strategies to advance small molecule SARS-CoV-2 discovery: Lessons from the pandemic and preparing for future health crises

Computational and Structural Biotechnology Journal, 2021

In silico screening of the DrugBank database to search for possible drugs against SARS-CoV-2

Molecules, 2021

SCovid: single-cell atlases for exposing molecular characteristics of COVID-19 across 10 human tissues

Nucleic acids research, 2022

Prediction of repurposed drugs for Coronaviruses using artificial intelligence and machine learning

Computational and Structural Biotechnology Journal, 2021

Structure-based drug repurposing against COVID-19 and emerging infectious diseases: methods, resources and discoveries

Briefings in Bioinformatics, 2021

CovidExpress: an interactive portal for intuitive investigation on SARS-CoV-2 related transcriptomes

bioRxiv, 2021

Comprehensive analyses of bioinformatics applications in the fight against COVID-19 pandemic

Biology and Chemistry, 2021

Methodology-centered review of molecular modeling, simulation, and prediction of SARS-CoV-2

Chemical Reviews, 2021

DRDOCK: A Drug Repurposing platform integrating automated docking, simulations and a log-odds-based drug ranking scheme

bioRxiv, 2021

Cryo-EM as a powerful tool for drug discovery: recent structural based studies of SARS-CoV-2

Applied Microscopy, 2021

COVID19db: a comprehensive database platform to discover potential drugs and targets of COVID-19 at whole transcriptomic scale

Nucleic acids research, 2022

Web resources facilitate drug discovery in treatment of COVID-19

Drug Discovery Today, 2021

A comprehensive review of the analysis and integration of omics data for SARS-CoV-2 and COVID-19

Briefings in Bioinformatics, 2022

Databases, Knowledgebases, and Software Tools for Virus Informatics

Translational Informatics, 2022

Anthraquinolone and quinolizine derivatives as an alley of future treatment for COVID-19: an in silico machine learning hypothesis

Scientific reports, 2021

PregTox: A Resource of Knowledge about Drug Fetal Toxicity

BioMed Research International, 2022

Drug Repurposing for the Identification of Compounds with Anti-SARS-CoV-2 Capability via Multiple Targets

Pharmaceutics, 2022

Copyright © 2023 TAIGenomics, All Rights Reserved.

Contact us


Taipei, Taiwan