News
Taiwan AI Lab partners with Shin Kong Hospital on realizing personalized medicine with QCheck system
2022/3/17
Taiwan AI Labs Partners With Shin-Kong Hospital for Ensuring Quality in Clinical Application of NGS
2022/3/17
Taiwan AI Labs partners with National Taiwan University build DockCov2 for COVID-19 soultion discovery
2020/11/1
Taiwan AI Labs Apply Drug Repurposing in Anti-Covid19 Database
2020/10/21
AI platform for automatic identification of malaria in CDC-funded challenge
2018/12/3
Blogs
Scientific Blog – Polygenic Risk Score (PRS)
2021/12/20
Scientific Blog – Deep learning for HLA characterization
2021/10/17
Scientific Blog – AutoML for Genomic AI
2021/10/13
DockCoV2:a drug database against SARS-CoV-2
2020/10/11
AI reads Medical Literature “variant2literature”
2019/6/13
Taiwan set up AI tools tracing virus transmission with sequencing and multi-omics data
Genomic epidemiology of SARS-CoV-2 strains
COVID19 Taiwan NHI Drug Data Repository by Taiwan AI Labs Intelligent Medical Genomics Team
2020/3/11
Our Publications
pubmedKB: an interactive web server for exploring biomedical entity relations in the biomedical literature
Nucleic Acids Research IF 16.971
2022.5.10
Efficiently predicting vancomycin resistance of Enterococcus faecium from MALDI-TOF MS spectra using a deep learning-based approach.
Frontiers in Microbiology IF 5.64 accepted
2022.4.28
ezGeno: An Automatic Model Selection Package for Genomic Data Analysis
Bioinformatics IF 6.937
2022.1.1
Connecting MHC-I-binding motifs with HLA alleles via deep learning
Communcations Biology IF 6.268
2021.10.18
DockCoV2: a drug database against SARS-CoV-2
Nucleic Acids Research IF 16.971
2021.1.8
Potential Therapeutic Agents for COVID-19 Based on the Analysis of Protease and RNA Polymerase Docking
Preprints
2020.2.27
GenEpi: gene-based epistasis discovery using machine learning
BMC Bioinformatics IF 3.169
2020.2.24
variant2literature: full text literature search for genetic variants
bioRxiv
2019.6.4
QCheck: A Web Server for Quality Check of Next Generation Sequencing Data with Standards and Guidelines
The Journal of molecular diagnostics: JMD
2019.6.1
Citations
TW23-GenEpi
Evidence of gene–gene interaction in hidradenitis suppurativa: a nationwide registry study of Danish twins
British Journal of Dermatology, 2022
Evaluating the detection ability of a range of epistasis detection methods on simulated data for pure and impure epistatic models
PLOS ONE, 2022
Gene-Based Testing of Interactions Using XGBoost in Genome-Wide Association Studies
Frontiers in Cell and Developmental Biology, 2021
Machine learning for detecting epistasis interactions and its relevance to personalized medicine in alzheimer’s disease: systematic review
Biomedical Engineering: Applications, Basis and Communications, 2021
Gene action, genetic variation, and GWAS: A user-friendly web tool
PLOS Genetics, 2021
Imputation and Reanalysis of ExomeChip Data Identifies Novel, Conditional and Joint Genetic Effects on Parkinson’s Disease Risk
Genes, 2021
Testing Gene-Gene Interactions Based on a Neighborhood Perspective in Genome-wide Association Studies
Frontiers in Genetics, 2021
TAIGenomics platform
Risk factors related to age at diagnosis of pancreatic cancer: a retrospective cohort pilot study
BMC Gastroenterology, 2022
Genetic analysis of a family presenting with coexisting cerebral cavernous malformations and polycystic kidney disease
Journal of the Formosan Medical Association, 2022
Investigating DYT1 in a Taiwanese dystonia cohort
Journal of the Formosan Medical Association, 2022
Genetic characteristics and epidemiology of inherited retinal degeneration in Taiwan
npj Genomic Medicine, 2021
Genetic Spectrum and Characteristics of Hereditary Optic Neuropathy in Taiwan
Genes, 2021
Genotypes Predispose Phenotypes—Clinical Features and Genetic Spectrum of ABCA4-Associated Retinal Dystrophies
Genes, 2020
DockCoV2
The 2022 Nucleic Acids Research database issue and the online molecular biology database collection
Nucleic acids research, 2022
Resources and computational strategies to advance small molecule SARS-CoV-2 discovery: Lessons from the pandemic and preparing for future health crises
Computational and Structural Biotechnology Journal, 2021
In silico screening of the DrugBank database to search for possible drugs against SARS-CoV-2
Molecules, 2021
SCovid: single-cell atlases for exposing molecular characteristics of COVID-19 across 10 human tissues
Nucleic acids research, 2022
Prediction of repurposed drugs for Coronaviruses using artificial intelligence and machine learning
Computational and Structural Biotechnology Journal, 2021
Structure-based drug repurposing against COVID-19 and emerging infectious diseases: methods, resources and discoveries
Briefings in Bioinformatics, 2021
CovidExpress: an interactive portal for intuitive investigation on SARS-CoV-2 related transcriptomes
bioRxiv, 2021
Comprehensive analyses of bioinformatics applications in the fight against COVID-19 pandemic
Biology and Chemistry, 2021
Methodology-centered review of molecular modeling, simulation, and prediction of SARS-CoV-2
Chemical Reviews, 2021
DRDOCK: A Drug Repurposing platform integrating automated docking, simulations and a log-odds-based drug ranking scheme
bioRxiv, 2021
Cryo-EM as a powerful tool for drug discovery: recent structural based studies of SARS-CoV-2
Applied Microscopy, 2021
COVID19db: a comprehensive database platform to discover potential drugs and targets of COVID-19 at whole transcriptomic scale
Nucleic acids research, 2022
Web resources facilitate drug discovery in treatment of COVID-19
Drug Discovery Today, 2021
A comprehensive review of the analysis and integration of omics data for SARS-CoV-2 and COVID-19
Briefings in Bioinformatics, 2022
Databases, Knowledgebases, and Software Tools for Virus Informatics
Translational Informatics, 2022
Anthraquinolone and quinolizine derivatives as an alley of future treatment for COVID-19: an in silico machine learning hypothesis
Scientific reports, 2021
PregTox: A Resource of Knowledge about Drug Fetal Toxicity
BioMed Research International, 2022
Drug Repurposing for the Identification of Compounds with Anti-SARS-CoV-2 Capability via Multiple Targets
Pharmaceutics, 2022
