TW23

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Our Publications

Genome-wide association study reveals ethnicity-specific SNPs associated with ankylosing spondylitis in the Taiwanese population

Journal of Translational Medicine IF 8.440

2022.12.12

scDrug: From single-cell RNA-seq to drug response prediction

Computational and Structural Biotechnology Journal IF 6.155

2022. 12. 8

Genome-wide analyses identify novel risk loci for cluster headache in Han Chinese residing in Taiwan

The Journal of Headache and Pain IF 8.588

2022.11.21

pubmedKB: an interactive web server for exploring biomedical entity relations in the biomedical literature

Nucleic Acids Research IF 16.971

2022.5.10

Efficiently predicting vancomycin resistance of Enterococcus faecium from MALDI-TOF MS spectra using a deep learning-based approach.

Frontiers in Microbiology IF 5.64 accepted

2022.4.28

ezGeno: An Automatic Model Selection Package for Genomic Data Analysis

Bioinformatics IF 6.937

2022.1.1

Connecting MHC-I-binding motifs with HLA alleles via deep learning

Communcations Biology IF 6.268

2021.10.18

DockCoV2: a drug database against SARS-CoV-2

Nucleic Acids Research IF 16.971

2021.1.8

Potential Therapeutic Agents for COVID-19 Based on the Analysis of Protease and RNA Polymerase Docking

Preprints

2020.2.27

GenEpi: gene-based epistasis discovery using machine learning

BMC Bioinformatics IF 3.169

2020.2.24

variant2literature: full text literature search for genetic variants

bioRxiv

2019.6.4

QCheck: A Web Server for Quality Check of Next Generation Sequencing Data with Standards and Guidelines

The Journal of molecular diagnostics: JMD

2019.6.1

Citations

TW23-GenEpi

TAIGenomics platform

DockCoV2

The 2022 Nucleic Acids Research database issue and the online molecular biology database collection

Nucleic acids research, 2022

Resources and computational strategies to advance small molecule SARS-CoV-2 discovery: Lessons from the pandemic and preparing for future health crises

Computational and Structural Biotechnology Journal, 2021

In silico screening of the DrugBank database to search for possible drugs against SARS-CoV-2

Molecules, 2021

SCovid: single-cell atlases for exposing molecular characteristics of COVID-19 across 10 human tissues

Nucleic acids research, 2022

Prediction of repurposed drugs for Coronaviruses using artificial intelligence and machine learning

Computational and Structural Biotechnology Journal, 2021

Structure-based drug repurposing against COVID-19 and emerging infectious diseases: methods, resources and discoveries

Briefings in Bioinformatics, 2021

CovidExpress: an interactive portal for intuitive investigation on SARS-CoV-2 related transcriptomes

bioRxiv, 2021

Comprehensive analyses of bioinformatics applications in the fight against COVID-19 pandemic

Biology and Chemistry, 2021

Methodology-centered review of molecular modeling, simulation, and prediction of SARS-CoV-2

Chemical Reviews, 2021

DRDOCK: A Drug Repurposing platform integrating automated docking, simulations and a log-odds-based drug ranking scheme

bioRxiv, 2021

Cryo-EM as a powerful tool for drug discovery: recent structural based studies of SARS-CoV-2

Applied Microscopy, 2021

COVID19db: a comprehensive database platform to discover potential drugs and targets of COVID-19 at whole transcriptomic scale

Nucleic acids research, 2022

Web resources facilitate drug discovery in treatment of COVID-19

Drug Discovery Today, 2021

A comprehensive review of the analysis and integration of omics data for SARS-CoV-2 and COVID-19

Briefings in Bioinformatics, 2022

Databases, Knowledgebases, and Software Tools for Virus Informatics

Translational Informatics, 2022

Anthraquinolone and quinolizine derivatives as an alley of future treatment for COVID-19: an in silico machine learning hypothesis

Scientific reports, 2021

PregTox: A Resource of Knowledge about Drug Fetal Toxicity

BioMed Research International, 2022

Drug Repurposing for the Identification of Compounds with Anti-SARS-CoV-2 Capability via Multiple Targets

Pharmaceutics, 2022

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